GenerateCopyNumberProfile: Simulate a clonal copy number profile

Description Usage Arguments Value

Description

Simulate a clonal copy number profile

Usage

1
2
GenerateCopyNumberProfile(cnPoolMaj, cnPoolMin, cnPoolMajFractions,
  cnPoolMinFractions, numVariants)

Arguments

cnPoolMaj

a pool of possible major copy numbers

cnPoolMin

a pool of possible minor copy numbers

cnPoolMajFractions

prevalence of possible major copy numbers

cnPoolMinFractions

prevalence of possible minor copy numbers

numVariants

number of variants

Value

cnProfile, a matrix with the minor copy number, major copy number, and total copy number as its 1st, 2nd, and 3rd column


keyuan/ccube documentation built on June 11, 2019, 8:38 p.m.