API for kimberlyroche/codaDE
What the Package Does in One 'Title Case' Line

Global functions
DA_by_ALDEx2 Man page Source code
DA_by_ANCOMBC Man page Source code
DA_by_DESeq2 Man page Source code
DA_by_MAST Man page Source code
DA_by_NB Man page Source code
DA_by_edgeR Man page Source code
DA_by_scran Man page Source code
DA_wrapper Man page Source code
build_Athanasiadou_reference Man page Source code
build_Barlow_reference Man page Source code
build_Morton_reference Man page Source code
build_simulated_reference Man page Source code
calc_DA_discrepancy Man page Source code
calc_threshold_DA Man page Source code
call_DA_ALDEx2 Man page Source code
call_DA_ANCOMBC Man page Source code
call_DA_DESeq2 Man page Source code
call_DA_MAST Man page Source code
call_DA_NB Man page Source code
call_DA_edgeR Man page Source code
call_DA_scran Man page Source code
characterize_dataset Man page Source code
compute_sf Man page Source code
fit_predictive_model Man page Source code
generate_highcontrast_palette Man page Source code
get_timestamp Man page Source code
normalize_Athanasiadou Man page Source code
parse_Athanasiadou Man page Source code
parse_Barlow Man page Source code
parse_ESCA Man page Source code
parse_Ferreira Man page Source code
parse_Gruen Man page Source code
parse_Hagai Man page Source code
parse_Hashimshony Man page Source code
parse_Kimmerling Man page Source code
parse_Klein Man page Source code
parse_Monaco Man page Source code
parse_Morton Man page Source code
parse_Muraro Man page Source code
parse_Owens Man page Source code
parse_Song Man page Source code
parse_VieiraSilva Man page Source code
parse_Yu Man page Source code
plot_bipartite_graph Man page Source code
plot_stacked_bars Man page Source code
pull_features Man page Source code
resample_counts Man page Source code
scaled_counts_ALDEx2 Man page Source code
scaled_counts_DESeq2 Man page Source code
scaled_counts_scran Man page Source code
simulate_sequence_counts Man page Source code
spike_in_ones Man page Source code
wrangle_validation_data Man page Source code
kimberlyroche/codaDE documentation built on May 11, 2022, 12:40 a.m.