View source: R/dissimilarity-based.R
calc_dm | R Documentation |
The default is to calculate Bray-Curtis dissimilarities after performing square-root transformations on the data. Send requests to add additional metrics.
calc_dm(tax_table, method = "bray_sq_trans")
tax_table |
The taxa table. |
method |
The method to use to calculate the dissimilarity metric. Available methods include: 'bray_sq_trans', 'bray', 'jaccard', 'sorensen'. Jaccard converts data to presence/absence before calculating dissimilarity. Sorensen is the presence/absence version of bray. |
A variable of class dist
.
dm = calc_dm(fruits_veggies$data_loaded, method = "bray_sq_trans")
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.