export_taxa_table: Export a taxa table as a text file

In leffj/mctoolsr: Microbial Community Data Analysis Tools

Export a taxa table as a text file

Description

A convenient way to export a loaded taxa table as a text file. Taxonomy strings will appear in the right most column. This is also a good way to save an taxa table to be loaded later. Output format is tab-delimited.

Usage

export_taxa_table(input, out_fp, map_fp)

Arguments

input	The input dataset as loaded by load_taxa_table or a taxa table of class data.frame.
out_fp	The output filepath.
map_fp	[OPTIONAL] The metadata map output filepath if you want to write it to file.

Examples

## Not run: 
export_taxa_table(fruits_veggies, "exported_taxa_table", "exported_map_file")

## End(Not run)

leffj/mctoolsr documentation built on Aug. 5, 2022, 1:27 a.m.