CancerDB: Cancer related genes and pathways curated from published...
In lixiangchun/lxctk: Li Xiangchun's tool-kit (lxctk)
Description
Usage
Format
Source
Description
Cancer related genes and pathways curated from published papers.
Usage
1
Format
A list of variables:
CCSP: Cancer cell signalling pathways
Smg127: SMGs identified in and across 12 human cancer types.
CDG435: Cancer driver genes
CGC: Cancer Gene Census
Source
1. Cyriac Kandoth et. al Mutational landscape and significance across 12 major cancer types doi:10.1038/nature12634
Figure2 | The 127 SMGs from 20 cellular processes in cancer identified in 12 cancer types
2. Bert Vogelstein et al. Cancer Genome Landscapes Science 339, 1546 (2013);DOI: 10.1126/science.1235122
Fig. 7. Cancer cell signaling pathways and the cellular processes they regulate. Curated from Table S2A.
3. David Tamborero et. al Comprehensive identification of mutational cancer driver genes across 12 tumor types. DOI: 10.1038/srep02650
Supplementary Information (2.58 KB), Supplementary Table 2.
lixiangchun/lxctk documentation built on May 21, 2019, 6:44 a.m.
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Description Usage Format Source
Description
Cancer related genes and pathways curated from published papers.
Usage
1 |
Format
A list of variables:
CCSP: Cancer cell signalling pathways
Smg127: SMGs identified in and across 12 human cancer types.
CDG435: Cancer driver genes
CGC: Cancer Gene Census
Source
1. Cyriac Kandoth et. al Mutational landscape and significance across 12 major cancer types doi:10.1038/nature12634
Figure2 | The 127 SMGs from 20 cellular processes in cancer identified in 12 cancer types
2. Bert Vogelstein et al. Cancer Genome Landscapes Science 339, 1546 (2013);DOI: 10.1126/science.1235122
Fig. 7. Cancer cell signaling pathways and the cellular processes they regulate. Curated from Table S2A.
3. David Tamborero et. al Comprehensive identification of mutational cancer driver genes across 12 tumor types. DOI: 10.1038/srep02650
Supplementary Information (2.58 KB), Supplementary Table 2.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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