getAllGenes4BrainRegion: Get all genes for brain region for particular specie

Description Usage Arguments Value See Also Examples

View source: R/brain_regions.R

Description

Get all genes annotated for specific brain region for specific specie. Function lookups Brain Region ID and Specie Tax ID columns and returns main information like internal Gene IDs, MGI ID, Human Entrez ID, Human Gene Name, Mouse Entrez ID, Mouse Gene Name, Localisation (presynaptic, postsynaptic, synaptosomal), PaperPMID and BrainRegion.

Usage

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getAllGenes4BrainRegion(brainRegion, taxID)

Arguments

brainRegion

ID for specific brain region

taxID

specie ID

Value

data.frame with the following columns:

See Also

Other BrainRegion functions: getBrainRegions(), getGenes4BrainRegion(), getPPIbyIDs4BrainRegion()

Other BrainRegion Gene functions: getGenes4BrainRegion()

Examples

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gns <- getAllGenes4BrainRegion(brainRegion = "Striatum", taxID = 10090)
head(gns)

lptolik/synaptome.db documentation built on Dec. 21, 2021, 11:50 a.m.