getAllGenes4Compartment: Extract all genes found in compartment

In lptolik/synaptome.db: Synamptosome Proteome Database

Extract all genes found in compartment

Description

Get all genes annotated for specific compartment. Function returns main information like internal Gene IDs, MGI ID, Human Entrez ID, Human Gene Name, Mouse Entrez ID, Mouse Gene Name, Rat Entrez ID, Rat Gene Name.

Usage

getAllGenes4Compartment(compartmentID)

Arguments

compartmentID

ID for specific compartment

Value

data.frame described in getGenesByID()

See Also

Other Gene functions: findGeneByCompartmentPaperCnt(), findGeneByPaperCnt(), findGeneByPapers(), findGenesByEntrez(), findGenesByName(), getGenes4Compartment(), getGenesByID()

Other Compartment functions: getCompartments(), getGenes4Compartment(), getPPIbyIDs4Compartment()

Examples

G <- getAllGenes4Compartment(compartmentID = 1) # 5560 rows

lptolik/synaptome.db documentation built on Sept. 13, 2023, 2:50 p.m.