plot_gsea_heatmap: Plot a Heatmap From gsea_analysis

In luciorq/txomics: Functional Analysis and Visualization of Transcriptomic Data

Description

Plot a heatmap of enriched gene sets from gsea_analysis

Usage

plot_gsea_heatmap(..., pvalue = 0.05, fdr = FALSE, names = NULL,
  occurrence = NULL)

Arguments

...	list of gsea_analisys results
pvalue	p-value cut-off for enrichment or differential consideration, default = 0.05
fdr	logical, default = FALSE should False discovery rate adjusted pvalue be used instead of pvalue
names	vector with names to be used at the x axis label
occurrence	Number of samples that the gene set needs to be enriched

luciorq/txomics documentation built on Sept. 3, 2020, 5:36 a.m.