plot_le_heatmap: Plot Leading Edge Heatmap

In luciorq/txomics: Functional Analysis and Visualization of Transcriptomic Data

Description

plot Ledading Edge analysis results enriched gene sets

Usage

plot_le_heatmap(gsea_res, pvalue = 0.05, fdr = FALSE, num = NULL)

Arguments

gsea_res	result from gsea_analysis
pvalue	p-value cut-off for enrichment or differential consideration, default = 0.05
fdr	logical, default = FALSE should False discovery rate adjusted pvalue be used instead of pvalue
num	number of genes to plot, based on the leading edge occurence, if num is negative, it is used the absolute num of genes with lesser occurence, if num is NULL all leading edge elements are used. Default = NULL.

luciorq/txomics documentation built on Sept. 3, 2020, 5:36 a.m.