API for macintyrelab/CNpare
Comparing tumour copy number profiles

Global functions
CCLE_metadata	Man page
CNPlot_events	Man page Source code
CNconvert	Man page Source code
CNpare	Man page
CNpare-package	Man page
calculateSumOfPosteriors	Man page Source code
cells_mapping	Man page
cells_segcn	Man page
extractCopynumberFeatures	Man page Source code
generateSampleByComponentMatrix	Man page Source code
getBPnum	Man page Source code
getBinsStartsEnds	Man page Source code
getCINProfiles	Man page Source code
getCINSamp	Man page Source code
getCN	Man page Source code
getCNbins	Man page Source code
getCNbins.bin	Man page Source code
getCNbins.sample	Man page Source code
getCentromereDistCounts	Man page Source code
getChangepointCN	Man page Source code
getClusterSamples	Man page Source code
getDifference	Man page Source code
getInputmatrix	Man page Source code
getNewSegments	Man page Source code
getOscilation	Man page Source code
getPloidy	Man page Source code
getProfiles	Man page Source code
getSampNames	Man page Source code
getSegRounded	Man page Source code
getSegTable	Man page Source code
getSegsize	Man page Source code
getSimilarities	Man page Source code
getSimilarities.sample	Man page Source code
getTopHit	Man page Source code
getUnifiedCN	Man page Source code
lengthChr	Man page
lower_norm	Man page Source code
normaliseMatrix	Man page Source code
pair_cosine	Man page Source code
pair_euclidean	Man page Source code
pair_manhattan	Man page Source code
pair_pearson	Man page Source code
plotClusters	Man page Source code
plot_diffdensity	Man page Source code
plot_simdensity	Man page Source code
quantifySignatures	Man page Source code
unifySegments	Man page Source code