getCN: Get copy numbers
In macintyrelab/CNpare: Comparing tumour copy number profiles
View source: R/cnsignature_functions.R
getCN R Documentation
Get copy numbers
Description
Helper function for extractCopynumberFeatures.
Approach developed by Geoff Macintyre et al. 2018
Usage
getCN(abs_profiles)
Arguments
abs_profiles
absolute copy-number profiles
Value
Matrix with copy numbers
Examples
profiles<-getProfiles(segcn=cells_segcn,
samples=unique(cells_segcn$sample)[1:4])
copynumber<-getCN(profiles)
macintyrelab/CNpare documentation built on April 15, 2022, 4:46 a.m.
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View source: R/cnsignature_functions.R
| getCN | R Documentation |
Get copy numbers
Description
Helper function for extractCopynumberFeatures. Approach developed by Geoff Macintyre et al. 2018
Usage
getCN(abs_profiles)
Arguments
abs_profiles |
absolute copy-number profiles |
Value
Matrix with copy numbers
Examples
profiles<-getProfiles(segcn=cells_segcn,
samples=unique(cells_segcn$sample)[1:4])
copynumber<-getCN(profiles)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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