Metadata.ClinicalNames: Retrieve names of all TCGA clinical data elements (CDEs).
In mariodeng/FirebrowseR: An 'API' Client for Broads 'Firehose' Pipeline
View source: R/Metadata.ClinicalNames.R
Description
Retrieve names of all patient-level clinical data elements (CDES) available in TCGA, unioned across all disease cohorts. A CDE will be listed here only when it has a value other than NA for at least 1 patient case in any disease cohort. For more information on how these CDEs are processed see our <a href="https://confluence.broadinstitute.org/display/GDAC/Documentation">pipeline documentation</a>.
Usage
1
Metadata.ClinicalNames(format = "json")
Arguments
format
Format of result. Default value is json. While json,tsv,csv are available.
mariodeng/FirebrowseR documentation built on May 21, 2019, 11:46 a.m.
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View source: R/Metadata.ClinicalNames.R
Description
Retrieve names of all patient-level clinical data elements (CDES) available in TCGA, unioned across all disease cohorts. A CDE will be listed here only when it has a value other than NA for at least 1 patient case in any disease cohort. For more information on how these CDEs are processed see our <a href="https://confluence.broadinstitute.org/display/GDAC/Documentation">pipeline documentation</a>.
Usage
1 | Metadata.ClinicalNames(format = "json")
|
Arguments
format |
Format of result. Default value is json. While json,tsv,csv are available. |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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