Metadata.SampleType.ShortLetterCode: Translate from symbolic to numeric TCGA sample codes.
In mariodeng/FirebrowseR: An 'API' Client for Broads 'Firehose' Pipeline
View source: R/Metadata.SampleType.ShortLetterCode.R
Description
Convert a TCGA sample type code in symbolic form (or 'short letter code' like TP, TR) to its corresponding numeric form (e.g. 01, 02).
Usage
1
Metadata.SampleType.ShortLetterCode(format = "json", short_letter_code = "")
Arguments
format
Format of result. Default value is json. While json,tsv,csv are available.
short_letter_code
TCGA sample type short letter code(s) (e.g. TP, NB, etc.). Multiple values are allowed TP,TB,TAM,TBM,NBC,CELLC,TRB,TR,TRBM,TAP,TM,THOC,NB,NT,NEBV,NBM,CELL,XP,XCL.
mariodeng/FirebrowseR documentation built on May 21, 2019, 11:46 a.m.
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View source: R/Metadata.SampleType.ShortLetterCode.R
Description
Convert a TCGA sample type code in symbolic form (or 'short letter code' like TP, TR) to its corresponding numeric form (e.g. 01, 02).
Usage
1 | Metadata.SampleType.ShortLetterCode(format = "json", short_letter_code = "")
|
Arguments
format |
Format of result. Default value is json. While json,tsv,csv are available. |
short_letter_code |
TCGA sample type short letter code(s) (e.g. TP, NB, etc.). Multiple values are allowed TP,TB,TAM,TBM,NBC,CELLC,TRB,TR,TRBM,TAP,TM,THOC,NB,NT,NEBV,NBM,CELL,XP,XCL. |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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