Metadata.Cohorts: Translate TCGA cohort abbreviations to full disease names.

Description Usage Arguments

View source: R/Metadata.Cohorts.R

Description

By default this function returns a table containing all TCGA cohort abbreviations and their corresponding disease names. A subset of that table may be obtained by explicitly specifying one or more cohort abbreviations.

Usage

1
Metadata.Cohorts(format = "json", cohort = "")

Arguments

format

Format of result. Default value is json. While json,tsv,csv are available.

cohort

Narrow search to one or more TCGA disease cohorts from the scrollable list. Multiple values are allowed ACC,BLCA,BRCA,CESC,CHOL,COAD,COADREAD,DLBC,ESCA,FPPP,GBM,GBMLGG,HNSC,KICH,KIPAN,KIRC,KIRP,LAML,LGG,LIHC,LUAD,LUSC,MESO,OV,PAAD,PCPG,PRAD,READ,SARC,SKCM,STAD,STES,TGCT,THCA,THYM,UCEC,UCS,UVM.


mariodeng/FirebrowseR documentation built on May 21, 2017, 6:48 p.m.