assign_binding_regions.numeric: Numeric Assignment of Binding Regions.

View source: R/templates.R

assign_binding_regions.numericR Documentation

Numeric Assignment of Binding Regions.

Description

Numeric S3 generic case for assigning binding regions.

Usage

## S3 method for class 'numeric'
assign_binding_regions(
  template.df,
  fw,
  rev,
  optimize.region = FALSE,
  primer.length = 20,
  gap.char = "-"
)

Arguments

template.df

Template data frame.

fw

Binding region data forward primers.

rev

Binding region data for reverse primers.

optimize.region

Should the primer binding region be optimized using secondary structure prediction?

primer.length

Probe length for optimizing template secondary structure.

Value

The template data frame with assigned binding regions.


matdoering/openPrimeR documentation built on July 4, 2025, 3:59 a.m.