mvmelt: Melt the metadata and abundance table at a given rank for the...

In microresearcher/MicroVis: Microbiome Analysis and Visualization

Melt the metadata and abundance table at a given rank for the desired features

Description

Melt the metadata and abundance table at a given rank for the desired features

Usage

mvmelt(dataset = NULL, rank = NULL, features = NULL, min_n = 3)

Arguments

dataset	MicroVis dataset (mvdata object). If not specified, defaults to active dataset.
rank	Get abundance table of features at this rank. Defaults to active rank.
features	Get the abundance data of certain features only. Defaults to all features.
min_n	Passed to cleanData() to limit to samples that belong to groups with at least 3 samples

Value

Table of merged metadata and abundance table

microresearcher/MicroVis documentation built on Feb. 8, 2024, 10:59 a.m.