mvstratify: Make a melted data table grouped by strata

In microresearcher/MicroVis: Microbiome Analysis and Visualization

Make a melted data table grouped by strata

Description

Make a melted data table grouped by strata

Usage

mvstratify(
  dataset = NULL,
  factor = NULL,
  stratifiers = NULL,
  rank = NULL,
  min_n = 3,
  verbose = T
)

Arguments

dataset	MicroVis dataset (mvdata object). If not specified, defaults to active dataset.
factor	Main factor whose groups will be in each grouped data table
stratifiers	Stratifier(s) to group the melted data table by
rank	Rank of dataset to choose features from
min_n	Passed to cleanGroups()
verbose	If set to TRUE, will print processing text

Value

Grouped, melted data table of metadata and abundance at a specified rank

microresearcher/MicroVis documentation built on Feb. 8, 2024, 10:59 a.m.