networkClusters: Get feature clusters determined by network analysis

In microresearcher/MicroVis: Microbiome Analysis and Visualization

Get feature clusters determined by network analysis

Description

Get feature clusters determined by network analysis

Usage

networkClusters(
  dataset = NULL,
  factor = NULL,
  rank = NULL,
  fts = NULL,
  method = c("se.mb", "se.glasso")
)

Arguments

dataset	MicroVis dataset. Defaults to the active dataset
factor	(Optional) Factor to split data into groups
rank	Rank of features to analyze. Defaults to the active rank
fts	(Optional) Vector of feature names to analyze. Defaults to all the features in the filtered dataset
method	Co-occurence analysis method

Value

List of feature clusters

microresearcher/MicroVis documentation built on Feb. 8, 2024, 10:59 a.m.