phyloDiversity: Faith's Phylogenetic Diversity Index
In microresearcher/MicroVis: Microbiome Analysis and Visualization
View source: R/analysisAlphaDiv.R
phyloDiversity R Documentation
Faith's Phylogenetic Diversity Index
Description
Faith's Phylogenetic Diversity Index
Usage
phyloDiversity(dataset = NULL, rooted = F)
Arguments
dataset
MicroVis dataset. Defaults to active dataset
rooted
Calculate rooted or unrooted Faith's phylogenetic diversity index?
Defaults to FALSE
Value
Single data.frame column of Faith's phylogenetic diversity index values
for each sample
microresearcher/MicroVis documentation built on Feb. 8, 2024, 10:59 a.m.
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View source: R/analysisAlphaDiv.R
| phyloDiversity | R Documentation |
Faith's Phylogenetic Diversity Index
Description
Faith's Phylogenetic Diversity Index
Usage
phyloDiversity(dataset = NULL, rooted = F)
Arguments
dataset |
MicroVis dataset. Defaults to active dataset |
rooted |
Calculate rooted or unrooted Faith's phylogenetic diversity index? Defaults to FALSE |
Value
Single data.frame column of Faith's phylogenetic diversity index values for each sample
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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