removeLowQuality: Remove Low Quality Samples
In microresearcher/MicroVis: Microbiome Analysis and Visualization
View source: R/sampleFiltering.R
removeLowQuality R Documentation
Remove Low Quality Samples
Description
Remove Low Quality Samples
Usage
removeLowQuality(dataset = NULL, silent = F)
Arguments
dataset
MicroVis dataset (mvdata object)
silent
Argument that is ultimately passed onto runSampleFilter(),
runFeatureFilter(), and runNormalizer(). If TRUE, it tells these functions
to NOT print out any of their processing messages.
Value
MicroVis dataset (mvdata object) with an updated list of low-quality
features for runSampleFilter() to filter out
microresearcher/MicroVis documentation built on Feb. 8, 2024, 10:59 a.m.
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View source: R/sampleFiltering.R
| removeLowQuality | R Documentation |
Remove Low Quality Samples
Description
Remove Low Quality Samples
Usage
removeLowQuality(dataset = NULL, silent = F)
Arguments
dataset |
MicroVis dataset (mvdata object) |
silent |
Argument that is ultimately passed onto runSampleFilter(), runFeatureFilter(), and runNormalizer(). If TRUE, it tells these functions to NOT print out any of their processing messages. |
Value
MicroVis dataset (mvdata object) with an updated list of low-quality features for runSampleFilter() to filter out
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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