runFeatureFilter: Feature Filter

In microresearcher/MicroVis: Microbiome Analysis and Visualization

Feature Filter

Description

This function is one of the processing functions called by processDataset() and identifies and removes features based on parameters set by the filter___ feature filtering functions

Usage

runFeatureFilter(dataset = NULL, temp = F, silent = F)

Arguments

dataset	MicroVis dataset (mvdata object)
temp	This parameter has no use in this function and can be removed
silent	Argument that is ultimately passed onto runSampleFilter(), runNormalization(), and runFeatureFilter(), telling them not to output any messages.

Value

MicroVis dataset (mvdata object) with features filtered out based on parameters set by the filter___ feature filtering functions

microresearcher/MicroVis documentation built on Feb. 8, 2024, 10:59 a.m.