sampleFreq: Frequency table of samples

In microresearcher/MicroVis: Microbiome Analysis and Visualization

Frequency table of samples

Description

Frequency table of samples

Usage

sampleFreq(
  dataset = NULL,
  characteristics,
  unique = NULL,
  subset = NULL,
  raw = F
)

Arguments

dataset	MicroVis dataset. Defaults to the active dataset
characteristics	A vector of 2 column names in the metadata with which to create the frequency table. First variable will be rows and second will be columsn.
unique	(Optional) Column to use to select unique samples
subset	(Optional) A named list where names are additional column names, and their values are values to subset the samples by.
raw	Whether to create frequency table from unprocessed data so that any samples excluded due to low quality or other sample filtering are included. Defaults to False.

Value

Returns a frequency table of two @characteristics

microresearcher/MicroVis documentation built on Feb. 8, 2024, 10:59 a.m.