univar: Perform Univariate Analysis

In microresearcher/MicroVis: Microbiome Analysis and Visualization

Perform Univariate Analysis

Description

Perform Univariate Analysis

Usage

univar(
  data = NULL,
  factor = NULL,
  stratifiers = NULL,
  rank = NULL,
  features = NULL,
  pairwise_comparisons = NULL,
  param = F,
  dataset_name = NULL
)

Arguments

data	Either a MicroVis dataset or a data table containing metadata and count values with samples as rows and metadata factors or features as columns
factor	Factor along which to form groups from the samples and perform the statistical analysis
stratifiers	(Optional) One or two factors to stratify the groups by
rank	Rank at which to perform the dataset. Defaults to the active rank
features	List of features to analyze. Defaults to all
pairwise_comparisons	For 3 or more groups, list of vectors of pairwise comparisons to conduct. Defaults to all possible pairwise comparisons
param	Run parametrized or nonparametrized univariate analysis? Default is FALSE
dataset_name	(Not recommended) Name of the dataset to save statistics to. This should not need to be used by users since the function can determine the name of the dataset directly passed to it, but not when it is called within another function.

Value

MicroVis dataset containing the statistics results in its "stats" attribute

microresearcher/MicroVis documentation built on Feb. 8, 2024, 10:59 a.m.