calc_seg_state: calc_seg_state
In mmariani123/MethylMasteR: What the Package Does (One Line, Title Case)
View source: R/methyl_master_helper_functions.R
calc_seg_state R Documentation
calc_seg_state
Description
common function used to calculate seg state from seg mean
Usage
calc_seg_state(seg.means = NULL, upper.thresh = 4, cutoff = NULL)
Arguments
seg.means
vector of seg.means
upper.thresh
CN state threshold, any number above this will be
assigned this value
cutoff
vector of cutoff threshold for loss and
gain respectively
Value
vector of calculated CNV states
mmariani123/MethylMasteR documentation built on June 22, 2022, 3:06 p.m.
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View source: R/methyl_master_helper_functions.R
| calc_seg_state | R Documentation |
calc_seg_state
Description
common function used to calculate seg state from seg mean
Usage
calc_seg_state(seg.means = NULL, upper.thresh = 4, cutoff = NULL)
Arguments
seg.means |
vector of seg.means |
upper.thresh |
CN state threshold, any number above this will be assigned this value |
cutoff |
vector of cutoff threshold for loss and gain respectively |
Value
vector of calculated CNV states
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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