champ.QC: champ.QC()
In mmariani123/MethylMasteR: What the Package Does (One Line, Title Case)

View source: R/methyl_master_champ_helper_functions.R

champ.QC

R Documentation

champ.QC()

Description

MethylMaster version of the champ.QC function()

Usage

champ.QC(
  beta = NULL,
  pheno = NULL,
  mdsPlot = NULL,
  densityPlot = NULL,
  dendrogram = NULL,
  PDFplot = NULL,
  Rplot = NULL,
  Feature.sel = NULL,
  resultsDir = NULL
)

Arguments

`infile`	Path to the input file
`champ.beta`	champ.beta parameter
`champ.pheno`	champ.pheno parameter
`champ.mds.plot`	champ.mds.plot parameter
`champ.density.plot`	champ.density.plot parameter
`champ.dendrogram`	champ.dendrogram parameter
`champ.pdf.plot`	champ.pdf parameter
`champ.rplot`	champ.rplot parameter
`champ.feature.sel`	champ.feature.sel parameter
`champ.results.dir`	champ.results.dir parameter