methyl_master_assay: methyl_master_assay

In mmariani123/MethylMasteR: What the Package Does (One Line, Title Case)

methyl_master_assay

Description

MethylMasteR Assay function Originally from sparseAssay() from the RaggedExperiment Package by Martin Morgan and Marcel Ramos 2021 I have modified my own version here for use in methyl master

Usage

methyl_master_assay(
  x,
  i = 1,
  withDimnames = TRUE,
  background = NA_integer_,
  sparse = FALSE
)

Arguments

x	A ragged experiment object
i	Integer or character name of assay to be transformed
withDimnames	Whether to include the dimnames on the retunred matrix
background	A value for the returned matrix
sparse	Whether to return a sparse matrix or not
sesame.idat.files.dir	The input dir with the .idat files

Value

A reduced ReaggedExperiment assay object

mmariani123/MethylMasteR documentation built on June 22, 2022, 3:06 p.m.