API for natverse/fafbseg
Support Functions for Analysis of FAFB EM Segmentation
| Global functions | |
|---|---|
| +.ngscene | Man page |
| -.ngscene | Man page |
| .chunkedgraph_token | Source code |
| .flywire_latestid | Source code |
| .onAttach | Source code |
| .onLoad | Source code |
| .onUnload | Source code |
| `+.ngscene` | Source code |
| `-.ngscene` | Source code |
| `[.nglayers` | Source code |
| `ngl_layers<-` | Source code |
| `ngl_segments<-` | Source code |
| add_celltype_info | Man page Source code |
| add_field_seq | Source code |
| as.character.ngscene | Man page Source code |
| as.data.frame.ng_raw_list | Source code |
| as.mesh3d.ng_raw | Man page Source code |
| as.mesh3d.ng_raw_list | Man page Source code |
| as.neuron.navis.core.dotprop.Dotprops | Source code |
| as.neuron.navis.core.skeleton.TreeNeuron | Source code |
| as.neuronlist.navis.core.base.BaseNeuron | Source code |
| as.neuronlist.navis.core.neuronlist.NeuronList | Source code |
| baseurl_from_url | Source code |
| boundingbox.cloudvolume.frontends.graphene.CloudVolumeGraphene | Source code |
| boundingbox.cloudvolume.lib.Bbox | Source code |
| braincircuits_login | Man page Source code |
| braincircuits_register | Man page Source code |
| braincircuits_token | Man page Source code |
| brainmaps_auth | Man page Source code |
| brainmaps_batchmeshes | Source code |
| brainmaps_clear_cache | Man page Source code |
| brainmaps_error_check | Source code |
| brainmaps_fetch | Man page Source code |
| brainmaps_geometry | Source code |
| brainmaps_listfragments | Man page Source code |
| brainmaps_skeleton | Man page Source code |
| brainmaps_volume | Man page Source code |
| brainmaps_voxdims | Source code |
| brainmaps_xyz2id | Man page Source code |
| catmaid2ngl | Man page Source code |
| catmaid2ngl.character | Man page Source code |
| catmaid2ngl.default | Man page Source code |
| catmaid2ngl.neuron | Man page Source code |
| catmaid2ngl.neuronlist | Man page Source code |
| cave_get_delta_roots | Source code |
| cave_latestid | Source code |
| cavedict_rtopy | Source code |
| cell_types_nomemo | Source code |
| cell_types_static | Source code |
| cgtimestamp2posixct | Source code |
| check_cloudvolume_url | Source code |
| check_package_available | Source code |
| check_python | Source code |
| check_reticulate | Source code |
| check_sampleurl | Source code |
| checkownpython | Source code |
| choose_segmentation | Man page Source code |
| chunkedgraph_token | Man page Source code |
| cloudvolume_secret_path | Source code |
| cloudvolume_version | Source code |
| col2hex | Source code |
| col_types | Source code |
| compare_ng_neuron | Man page Source code |
| crossprod3D | Source code |
| current_python | Source code |
| cv_secretdir | Source code |
| cv_write_secret | Source code |
| default_pyenv | Source code |
| df2appendpayload | Source code |
| df2flytable | Source code |
| df2updatepayload | Source code |
| download_flywire_connection_files | Source code |
| download_flywire_release_data | Man page Source code |
| download_neuron_obj | Man page Source code |
| dr_fafbseg | Man page Source code |
| draco2mesh3d | Source code |
| dracopy_available | Source code |
| extract_ntpredictions.neuron | Source code |
| extract_ntpredictions.neuronlist | Source code |
| extract_zip_files | Source code |
| fafb14_to_flywire_ids | Man page Source code |
| fafb14_to_flywire_ids.neuron | Source code |
| fafb14_to_flywire_ids_timed.neuron | Source code |
| fafb2flywire | Man page Source code |
| fafbseg | Man page |
| fafbseg-ids | Man page |
| fafbseg-package | Man page |
| fafbseg_userdir | Source code |
| fafbsegpy4dataset | Source code |
| fct2nginfo | Man page Source code |
| fetch_all_curl | Man page Source code |
| find_merged_segments | Man page Source code |
| find_merged_segments_slow | Man page Source code |
| find_topn | Man page Source code |
| flytable-queries | Man page |
| flytable2df | Source code |
| flytable_alltables | Man page Source code |
| flytable_append_rows | Man page Source code |
| flytable_base | Man page Source code |
| flytable_base4table | Source code |
| flytable_cell_types | Man page Source code |
| flytable_columns | Man page Source code |
| flytable_delete_rows | Source code |
| flytable_fix_coltypes | Source code |
| flytable_list_rows | Man page Source code |
| flytable_list_rows_chunk | Source code |
| flytable_list_selected | Man page Source code |
| flytable_login | Man page Source code |
| flytable_meta | Man page Source code |
| flytable_nrow | Man page Source code |
| flytable_parse_date | Source code |
| flytable_query | Man page Source code |
| flytable_set_celltype | Man page Source code |
| flytable_set_token | Man page Source code |
| flytable_update_rows | Man page Source code |
| flytable_workspaces | Source code |
| flywire2fafb | Man page Source code |
| flywire_adjacency_matrix | Man page Source code |
| flywire_adjacency_matrix2 | Man page Source code |
| flywire_api_url | Source code |
| flywire_cave_client | Man page |
| flywire_cave_query | Man page Source code |
| flywire_change_log | Man page Source code |
| flywire_cloudvolume | Man page Source code |
| flywire_cloudvolume_url | Source code |
| flywire_connectome_basedir | Source code |
| flywire_connectome_data | Man page Source code |
| flywire_connectome_data_message | Source code |
| flywire_connectome_data_version | Man page Source code |
| flywire_connectome_dir | Source code |
| flywire_connectome_file | Source code |
| flywire_connectome_latest_nomemo | Source code |
| flywire_dcvs | Man page Source code |
| flywire_errorhandle | Source code |
| flywire_expandurl | Man page Source code |
| flywire_fetch | Man page Source code |
| flywire_ids | Man page Source code |
| flywire_islatest | Man page Source code |
| flywire_l2ids | Man page Source code |
| flywire_last_modified | Man page Source code |
| flywire_latestid | Man page Source code |
| flywire_leaves | Man page Source code |
| flywire_leaves_cache_info | Source code |
| flywire_leaves_cached | Source code |
| flywire_leaves_frombytes | Source code |
| flywire_leaves_impl | Source code |
| flywire_leaves_tobytes | Source code |
| flywire_nearest_nuclei | Man page Source code |
| flywire_neurons_add_synapses | Man page Source code |
| flywire_neurons_add_synapses.neuron | Man page Source code |
| flywire_neurons_add_synapses.neuronlist | Man page Source code |
| flywire_nm2raw | Man page Source code |
| flywire_ntplot | Man page Source code |
| flywire_ntplot3d | Man page Source code |
| flywire_ntpred | Man page Source code |
| flywire_nuclei | Man page Source code |
| flywire_partner_summary | Man page Source code |
| flywire_partner_summary2 | Man page Source code |
| flywire_partners | Man page Source code |
| flywire_partners_cave | Source code |
| flywire_raw2nm | Man page Source code |
| flywire_report | Source code |
| flywire_rootid | Man page Source code |
| flywire_rootid_cached | Source code |
| flywire_roots_helper | Source code |
| flywire_scene | Man page Source code |
| flywire_set_token | Man page Source code |
| flywire_shortenurl | Man page Source code |
| flywire_sirepo_dir | Source code |
| flywire_sirepo_download | Source code |
| flywire_sirepo_file | Man page Source code |
| flywire_sirepo_file_memo | Man page |
| flywire_sirepo_update | Source code |
| flywire_sirepo_url | Source code |
| flywire_supervoxels | Source code |
| flywire_supervoxels_binary | Source code |
| flywire_synapse_annotations | Man page Source code |
| flywire_timestamp | Man page Source code |
| flywire_updateids | Man page Source code |
| flywire_use_static_cell_types | Source code |
| flywire_user_info | Man page Source code |
| flywire_version | Source code |
| flywire_voxdims | Man page |
| flywire_xyz2id | Man page Source code |
| flywireids_tbl | Source code |
| git_pull_helper | Source code |
| google_report | Source code |
| id2char | Source code |
| id64 | Source code |
| ids2sqlin | Source code |
| internet_ok | Source code |
| is.json | Source code |
| is.ngscene | Source code |
| is_rawcoord | Source code |
| list2df | Source code |
| local_or_google | Source code |
| make_batch | Source code |
| make_batches | Source code |
| make_batches_chunked | Source code |
| make_merge_graph | Man page Source code |
| map1 | Source code |
| mapmany | Source code |
| mapwrapper | Source code |
| merge_graph_components | Man page Source code |
| meshparty_skeletonize | Man page Source code |
| navis2nat_neuron | Source code |
| navis2nat_neuronlist | Source code |
| nginfo | Source code |
| ngl_add_colours | Man page Source code |
| ngl_annotation_layer | Source code |
| ngl_annotation_layers | Man page Source code |
| ngl_annotations | Man page Source code |
| ngl_blank_scene | Man page Source code |
| ngl_decode_scene | Man page Source code |
| ngl_encode_url | Man page Source code |
| ngl_layer_summary | Source code |
| ngl_layers | Man page Source code |
| ngl_layers<- | Man page |
| ngl_segmentation | Source code |
| ngl_segments | Man page Source code |
| ngl_segments<- | Man page |
| nglayers | Man page |
| ngscene | Man page |
| normalise_cave_annotation_df | Source code |
| ntpredictions_tbl | Source code |
| null2na | Source code |
| nullToZero | Source code |
| open_fafb_ngl | Man page Source code |
| ownpythonrequested | Source code |
| pandas2df | Source code |
| pandas_version | Source code |
| parse_brainmaps_uri | Source code |
| parse_json | Source code |
| paste_coords | Source code |
| print.ngscene | Source code |
| print.ntprediction | Man page Source code |
| process_one_layer | Source code |
| py_cloudvolume | Source code |
| py_module_info | Source code |
| py_report | Source code |
| py_skel_imports | Source code |
| py_skeletor | Source code |
| pyarrow_version | Source code |
| pyids2bit64 | Source code |
| python_module_path | Source code |
| random_id | Source code |
| random_idchunked | Source code |
| read.coords.from.zip | Source code |
| read.neuron.brainmaps | Man page Source code |
| read.neuron.from.zip | Source code |
| read.neurons.brainmaps | Man page Source code |
| read.swc.from.zip | Source code |
| read_brainmaps_meshes | Man page Source code |
| read_cloudvolume_meshes | Man page Source code |
| read_graphene_meshes | Source code |
| read_l2dp | Man page Source code |
| read_l2skel | Man page Source code |
| read_mergeinfo | Man page Source code |
| read_ng_dump | Man page Source code |
| read_ng_raw | Man page Source code |
| read_ng_raw_chunk | Source code |
| read_ng_raw_header | Source code |
| read_nginfo | Source code |
| read_segments | Man page Source code |
| read_segments2 | Man page Source code |
| read_topn | Man page Source code |
| register_fafb_flywire | Source code |
| reroot_hairball | Man page Source code |
| rids2pyint | Source code |
| rids2raw | Source code |
| robust_read_catmaid_neuron | Source code |
| save_cloudvolume_meshes | Man page Source code |
| segmentid2zip | Man page Source code |
| segments2batches | Source code |
| segments2fragmentdf | Source code |
| server_address | Source code |
| shorturl | Source code |
| simple_python | Man page Source code |
| simple_python_base | Source code |
| simplify_meshlist | Source code |
| skeletor | Man page Source code |
| skelsforsegment | Man page Source code |
| skelsforsegments | Source code |
| spine_svids2synapses | Source code |
| sql2fields | Source code |
| standard_nuclei | Source code |
| subtree | Source code |
| subtree.neuronlist | Source code |
| swc2segmentid | Man page Source code |
| synlinks_tbl | Source code |
| tabify_coords | Man page Source code |
| tempdir4zip | Source code |
| temproot | Source code |
| try_with_time_limit | Source code |
| ts2pydatetime | Source code |
| unlist.ng_raw_list | Source code |
| untangle_dcv_data | Source code |
| untangle_dcv_data_v3 | Source code |
| update_miniconda_base | Source code |
| update_rootids | Source code |
| urldecode | Source code |
| urlencode | Source code |
| valid_id | Source code |
| vcache64 | Source code |
| vcache_mget | Source code |
| vcache_mset | Source code |
| voxdims.ngscene | Man page Source code |
| with_segmentation | Man page Source code |
| write_nginfo | Man page Source code |
| xform.ngscene | Man page Source code |
| xform_brain_all_xyz | Source code |
| xyzmatrix | Man page |
| xyzmatrix.ng_raw | Man page Source code |
| xyzmatrix.ng_raw_list | Man page Source code |
| xyzmatrix.ngscene | Source code |
| zip2segmentstem | Man page Source code |
| zip_list | Source code |
| zip_path | Source code |
