go_back_to_original_process: Scale the parameters back to the original process

In pbastide/PhylogeneticEM: Automatic Shift Detection using a Phylogenetic EM

Scale the parameters back to the original process

Description

go_back_to_original_process takes the inferred parameters with a BM on a rescaled tree, and gives back the equivalent parameters of the OU on the original process.

Usage

go_back_to_original_process(
  phy_original,
  known.selection.strength,
  sBM_variance,
  params
)

Arguments

phy_original	the original phylogenetic tree
known.selection.strength	the known selection strength of the original OU.
sBM_variance	boolean. Is the root random ?
params	the inferred parameters of the BM on the re-scaled tree.

Value

params_scOU the equivalent parameters of the OU on the original tree.

pbastide/PhylogeneticEM documentation built on Feb. 12, 2024, 1:27 a.m.