segmentation.BM: Segmentation in the BM case
In pbastide/PhylogeneticEM: Automatic Shift Detection using a Phylogenetic EM
segmentation.BM R Documentation
Segmentation in the BM case
Description
segmentation.BM performs the segmentation algorithm described.
Usage
segmentation.BM(nbr_of_shifts, costs0, diff_exp)
Arguments
nbr_of_shifts
Number of shifts on the phylogeny allowed
costs0
Cost of each edge
diff_exp
Difference of expectations
Details
This function takes the largest values of costs0, and make them null,
thanks to delta and tau.
Value
List containing : edges_max : array of nbr_of_shifts edges where
costs0 is maximal.
shifts:list containing the computed tau and delta
pbastide/PhylogeneticEM documentation built on Feb. 12, 2024, 1:27 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
| segmentation.BM | R Documentation |
Segmentation in the BM case
Description
segmentation.BM performs the segmentation algorithm described.
Usage
segmentation.BM(nbr_of_shifts, costs0, diff_exp)
Arguments
nbr_of_shifts |
Number of shifts on the phylogeny allowed |
costs0 |
Cost of each edge |
diff_exp |
Difference of expectations |
Details
This function takes the largest values of costs0, and make them null, thanks to delta and tau.
Value
List containing : edges_max : array of nbr_of_shifts edges where costs0 is maximal. shifts:list containing the computed tau and delta
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.