update.parsimonyCost: Actualization for parsimonyCost.
In pbastide/PhylogeneticEM: Automatic Shift Detection using a Phylogenetic EM
View source: R/parsimonyNumber.R
update.parsimonyCost R Documentation
Actualization for parsimonyCost.
Description
update.parsimonyCost compute the line vector of a parent node, given
the vectors of its daughters.
Usage
update.parsimonyCost(daughtersParams, ...)
Arguments
daughtersParams
a (ndaughters) x (nclus) matrix with the line vectors of the cost
for the daughters node.
Details
This function computes the cost of putting the parent in a state k, as the
minimum number of shifts needed to get the given clustering of the trees bellow
parental node.
Value
A line vector corresponding to the parent node.
pbastide/PhylogeneticEM documentation built on Feb. 12, 2024, 1:27 a.m.
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View source: R/parsimonyNumber.R
| update.parsimonyCost | R Documentation |
Actualization for parsimonyCost.
Description
update.parsimonyCost compute the line vector of a parent node, given
the vectors of its daughters.
Usage
update.parsimonyCost(daughtersParams, ...)
Arguments
daughtersParams |
a (ndaughters) x (nclus) matrix with the line vectors of the cost for the daughters node. |
Details
This function computes the cost of putting the parent in a state k, as the minimum number of shifts needed to get the given clustering of the trees bellow parental node.
Value
A line vector corresponding to the parent node.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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