meanBar: meanBar: Barplot of your genes of interest!

View source: R/meanBar.R

meanBarR Documentation

meanBar: Barplot of your genes of interest!

Description

barplot of gene expression

barplot of gene expression

Usage

meanBar(deseqAbs, genes, cond = NULL, FPKM = FALSE, points = FALSE)

Arguments

deseqAbs:

deseqAbs object with FPKMMean and test data

genes:

a vector of gene IDs to be extracted from rownames of data

cond:

a vector of conditions to plot

FPKM:

Set to TRUE if FPKM should be plotted instead of baseMean

points:

Set to TRUE if points should be added

deseqAbs:

deseqAbs object with FPKMMean and test data

genes:

a vector of gene IDs to be extracted from rownames of data

cond:

a vector of conditions to plot

FPKM:

Set to TRUE if FPKM should be plotted instead of baseMean

points:

Set to TRUE if points should be added

Examples

genes <- c("DNMT1","TRIM28","PAX6","DCX","SOX2","AGO2")
meanBar(dnmt,genes)
genes <- c("DNMT1","TRIM28","PAX6","DCX","SOX2","AGO2")
meanBar(dnmt,genes)

perllb/deseqAbstraction documentation built on Oct. 31, 2023, 2:13 a.m.