API for philliplab/EpitopeMatcher
Epitope Matcher
| Global functions | |
|---|---|
| .LANL_HLA_data | Man page |
| .Patient_HLA | Man page |
| .Scoring_Job | Man page |
| .sequence_comparison_stats | Man page Source code |
| BETWEEN10 | Man page |
| BETWEEN38 | Man page |
| LANL_HLA_data-class | Man page |
| Patient_HLA-class | Man page |
| Scoring_Job-class | Man page |
| WITHIN5 | Man page |
| build_scoring_jobs | Man page Source code |
| epitope_found | Man page Source code |
| find_epitope_in_ref | Man page Source code |
| flatten_lanl_hla | Man page Source code |
| get_epitope | Man page |
| get_epitope,Scoring_Job-method | Man page |
| get_hla_details | Man page |
| get_hla_details,Scoring_Job-method | Man page |
| get_hla_genotype | Man page |
| get_hla_genotype,Scoring_Job-method | Man page |
| get_patient_ids | Man page |
| get_patient_ids,AAStringSet-method | Man page |
| get_patient_ids,Patient_HLA-method | Man page |
| get_set_of_test_data | Man page Source code |
| get_test_lanl_hla_data | Man page Source code |
| get_test_patient_hla_data | Man page Source code |
| get_test_query_alignment | Man page Source code |
| list_scores_to_compute | Man page Source code |
| match_epitopes | Man page Source code |
| match_patient_hla_to_query_alignment | Man page Source code |
| read_lanl_hla | Man page Source code |
| read_patient_hla | Man page Source code |
| read_query_alignment | Man page Source code |
| run_EpitopeMatcher_app | Man page Source code |
| score_all_epitopes | Man page Source code |
| score_epitope | Man page Source code |
