qc_get_biome: Get the biome, temperature and precipitation of a site

In sapfluxnet/sapfluxnetQC1: Package with functions related to sapfluxnet project data

Description

This function takes a data frame of site metadata, including latitude (si_lat) and longitude (si_long) columns, gets climatic data from WorldClim 1.4 using the GSODR package and returns the same data frame with extra columns of mean annual temperature (si_mat), mean annual precipitation (si_map) and biome (si_biome) according to qc_get_biomes_spdf.

Usage

qc_get_biome(data, merge_deserts = FALSE, parent_logger = "test")

Arguments

data	Data frame of site metadata, including latitude (si_lat) and longitude (si_long) columns that are used to obtain climatic data.
merge_deserts	Logical indicating if desert biomes should be merged in a single biome. By default, deserts are not merged.

Value

The same data frame with extra columns of mean annual temperature (si_mat), mean annual precipitation (si_map) and biome (si_biome)

See Also

Other Quality Checks Functions: create_dic, qc_coordinates, qc_data_results_table, qc_env_ranges, qc_env_vars_presence, qc_ext_radiation, qc_factor_values, qc_fix_timestamp, qc_get_biomes_spdf, qc_get_sapw_md, qc_get_timestep, qc_get_timezone, qc_is_timestamp, qc_md_cols, qc_md_results_table, qc_mind_the_gap_eff, qc_mind_the_gap, qc_out_hampel_filter, qc_out_of_range, qc_out_remove, qc_outliers_process, qc_outliers_subs, qc_pl_treatments, qc_rad_conversion, qc_range_dic, qc_sapf_ranges, qc_sapw_area_calculator, qc_sapw_conversion, qc_set_timezone, qc_soil_texture, qc_species_names_info, qc_species_names, qc_species_verification, qc_start_process, qc_swc_check, qc_swc_fix, qc_time_interval, qc_timestamp_concordance, qc_timestamp_errors, qc_timestamp_nas

sapfluxnet/sapfluxnetQC1 documentation built on May 29, 2019, 1:50 p.m.