qc_species_verification: Check if sp_name and sp_ntrees coincides with plants...
In sapfluxnet/sapfluxnetQC1: Package with functions related to sapfluxnet project data
Description
Usage
Arguments
Details
Value
Coincidence
See Also
Description
qc_species_verification checks for coincidence in the number and species
names between species_md and plant_md
Usage
1
qc_species_verification(species_md, plant_md, parent_logger = "test")
Arguments
species_md
Data frame containing species metadata.
plant_md
Data frame containing plant metadata.
Details
In order to check if provided species metadata coincides with provided plant
metadata, species names and number of plants in each species are checked
against plant metadata.
Value
A data frame with the species provided in plant and species metadata,
as well as the number of trees of each species in both metadata.
coincidence column indicates result of checking both numbers and
presence of the same species.
Coincidence
Possible values of coincidence column in results data frame are:
TRUE, indicating both metadata have the same species and the number
of trees are the same; FALSE indicates that both metadata have the
same species, but the number of trees are no the same; finally,
NA indicates that the species are not the same in both metadata.
See Also
Other Quality Checks Functions: create_dic,
qc_coordinates,
qc_data_results_table,
qc_env_ranges,
qc_env_vars_presence,
qc_ext_radiation,
qc_factor_values,
qc_fix_timestamp,
qc_get_biomes_spdf,
qc_get_biome, qc_get_sapw_md,
qc_get_timestep,
qc_get_timezone,
qc_is_timestamp, qc_md_cols,
qc_md_results_table,
qc_mind_the_gap_eff,
qc_mind_the_gap,
qc_out_hampel_filter,
qc_out_of_range,
qc_out_remove,
qc_outliers_process,
qc_outliers_subs,
qc_pl_treatments,
qc_rad_conversion,
qc_range_dic, qc_sapf_ranges,
qc_sapw_area_calculator,
qc_sapw_conversion,
qc_set_timezone,
qc_soil_texture,
qc_species_names_info,
qc_species_names,
qc_start_process,
qc_swc_check, qc_swc_fix,
qc_time_interval,
qc_timestamp_concordance,
qc_timestamp_errors,
qc_timestamp_nas
sapfluxnet/sapfluxnetQC1 documentation built on May 29, 2019, 1:50 p.m.
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Description Usage Arguments Details Value Coincidence See Also
Description
qc_species_verification checks for coincidence in the number and species
names between species_md and plant_md
Usage
1 | qc_species_verification(species_md, plant_md, parent_logger = "test")
|
Arguments
species_md |
Data frame containing species metadata. |
plant_md |
Data frame containing plant metadata. |
Details
In order to check if provided species metadata coincides with provided plant metadata, species names and number of plants in each species are checked against plant metadata.
Value
A data frame with the species provided in plant and species metadata,
as well as the number of trees of each species in both metadata.
coincidence column indicates result of checking both numbers and
presence of the same species.
Coincidence
Possible values of coincidence column in results data frame are:
TRUE, indicating both metadata have the same species and the number
of trees are the same; FALSE indicates that both metadata have the
same species, but the number of trees are no the same; finally,
NA indicates that the species are not the same in both metadata.
See Also
Other Quality Checks Functions: create_dic,
qc_coordinates,
qc_data_results_table,
qc_env_ranges,
qc_env_vars_presence,
qc_ext_radiation,
qc_factor_values,
qc_fix_timestamp,
qc_get_biomes_spdf,
qc_get_biome, qc_get_sapw_md,
qc_get_timestep,
qc_get_timezone,
qc_is_timestamp, qc_md_cols,
qc_md_results_table,
qc_mind_the_gap_eff,
qc_mind_the_gap,
qc_out_hampel_filter,
qc_out_of_range,
qc_out_remove,
qc_outliers_process,
qc_outliers_subs,
qc_pl_treatments,
qc_rad_conversion,
qc_range_dic, qc_sapf_ranges,
qc_sapw_area_calculator,
qc_sapw_conversion,
qc_set_timezone,
qc_soil_texture,
qc_species_names_info,
qc_species_names,
qc_start_process,
qc_swc_check, qc_swc_fix,
qc_time_interval,
qc_timestamp_concordance,
qc_timestamp_errors,
qc_timestamp_nas
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