clinic_getCoxTable: get a model result of univariate and multivariate Cox...

In shijianasdf/BasicBioinformaticsAnalysisFromZhongShan: Launch Usual Clinical tool for Kind Yield

Description

getCoxTable help get a model result of univariate and multivariate Cox regression Models.

Usage

getCoxTable(data,
            time.col,
            status.col,
            stepwise=F,direction="both",
            cluster,control,
            dig=2,
            names = "test1")

Arguments

data	a data frame containing cluster,time and status value.
time.col	colnames of time value
status.col	colnames of status value
stepwise	Whether use stepwise strategy to simple multiple cox model
direction	method of stepwise.See MASS::stepAIC.
cluster	the cluster values like age and sex.
dig	2.the decimal place of output numeric value.
names	part of file name.

Value

a list containing results of univariate and multivariate models.

Author(s)

Weibin Huang

Examples

library(survival)
data(lung)
cluster = c("age","sex","ph.ecog","ph.karno","pat.karno")
## Not use stepwise
l1 <- getCoxTable(data=lung,
                  time.col="time",
                  status.col = "status",
                  cluster=cluster,
                  dig=2,
                  names = "a1")

## Use stepwise
l1 <- getCoxTable(data=lung,
                  time.col="time",
                  status.col = "status",
                  cluster=cluster,
                  stepwise=T,
                  dig=2,
                  names = "a2")

shijianasdf/BasicBioinformaticsAnalysisFromZhongShan documentation built on Jan. 3, 2020, 10:08 p.m.