projectOnNetwork: Project the gene expression matrix onto a lower space of the...

In sqjin/CellChat: Inference and analysis of cell-cell communication from single-cell and spatial transcriptomics data

Project the gene expression matrix onto a lower space of the genes defined in the projecting network

Description

Project the gene expression matrix onto a lower space of the genes defined in the projecting network

Usage

projectOnNetwork(gene_expression, new_features, missing.value = 0)

Arguments

gene_expression	gene expression matrix
new_features	the genes in the network, on which to project the gene expression matrix
missing.value	value to assign to genes that are in network, but missing from gene expression matrix

Value

the gene expression matrix projected onto the gene space defined by new_features

sqjin/CellChat documentation built on Nov. 10, 2023, 4:29 a.m.