dot-setExpiryParameters: Set expiry parameters

In ss-lab-cancerunit/SpiderSeqR: A Tool for Integration of Big Bio Data

Description

Set expiry parameters

Usage

.setExpiryParameters(
  general_expiry,
  sra_expiry,
  geo_expiry,
  srr_gsm_expiry,
  missing_file_number
)

Arguments

general_expiry	Maximum number of days since database file modification
sra_expiry, geo_expiry, srr_gsm_expiry	Maximum number of days since modification of respective database files
missing_file_number	Number of missing files

Value

Expiry parameters

Sets expiry parameters for three respective databases, according to the logic that specific parameters should be used where possible and for missing parameters general_expiry will be used (i.e. if all arguments are provided, general_expiry will be ignored). Also checks whether the expiry parameters are numeric and returns appropriate errors or warnings.

ss-lab-cancerunit/SpiderSeqR documentation built on Nov. 2, 2020, 12:18 a.m.