getDatabaseInformation: Get summaries of database contents
In ss-lab-cancerunit/SpiderSeqR: A Tool for Integration of Big Bio Data

Description Usage Value Available information Examples

getDatabaseInformation allows users to get insights into the contents of certain parts of the databases. Run the function and select the menu option with the summary of interest.

1	getDatabaseInformation()

Data frame with requested information

In order to obtain the most up to date list of available information, please run the function Some of the information available includes:

Library_strategy counts in SRA database - a dataframe with all the library strategies featuring in SRA and their counts
taxon_id's and their counts
source_name_ch1 and their counts
label_ch and their counts
molecule_ch1 and their counts
Number of accessions in the SRA and GEO databases
...