listValidColumns: List valid columns within the data frames
In ss-lab-cancerunit/SpiderSeqR: A Tool for Integration of Big Bio Data

Description Usage Value Column Categories Examples

List valid columns within the data frames

1	listValidColumns()

A list with column names grouped into categories

The following categories are available:

SRA - columns from the sra table (SRA database) with added 'SRA_' prefix
GSM - columns from the gsm table (GEO database) with added 'GSM_' prefix
GSE - columns from the gse table (GSE database) with added 'GSE_' prefix
Other - other columns (created within the pacakge) with added 'OTH_' prefix

startSpiderSeqRDemo()
listValidColumns() # List all columns
listValidColumns()$SRA # List columns from sra table
listValidColumns()$GSM # List columns from gsm table
listValidColumns()$GSE # List columns from gse table
listValidColumns()$Other # List other columns