Run_AUCell: Run AUCell

In supatt-lab/SingCellaR: SingCellaR: an integrative analysis tool for single-cell RNA sequencing (scRNA-seq) data

Run AUCell

Description

Run AUCell

Usage

Run_AUCell(
  object,
  AUCell_buildRankings.file = "",
  geneSets.gmt.file = "",
  n.random.genes = 500
)

Arguments

object	The SingCellaR object.
AUCell_buildRankings.file	The input file name of AUCell rankings.
geneSets.gmt.file	The GMT file name that contains gene sets.
n.random.genes	The number of a random gene set.

supatt-lab/SingCellaR documentation built on Aug. 24, 2023, 5:49 p.m.