plot_forceDirectedGraph_label_by_selected_sampleID: Plot force-directed graph with selected sampleIDs

In supatt-lab/SingCellaR: SingCellaR: an integrative analysis tool for single-cell RNA sequencing (scRNA-seq) data

Plot force-directed graph with selected sampleIDs

Description

Plot force-directed graph with selected sampleIDs

Usage

plot_forceDirectedGraph_label_by_selected_sampleID(
  object,
  selected.sampleID = c(),
  title = "",
  vertex.size = 0.5,
  vertex.front.color = "red",
  edge.size = 0.2,
  edge.color = "white",
  vertex.base.color = "gray",
  alpha.base = 0.2
)

Arguments

object	The SingCellaR object.
selected.sampleID	The vector of selected sampleIDs.
title	The title of the plot.
vertex.front.color	The color of selected samples. Default red
edge.size	The size of the edge. Default 0.2
edge.color	The edge color. Default white
vertex.base.color	The node base color. Default gray
alpha.base	The alpha parameter of node. Default 0.2
vertext.size	The node size. Default 0.5

supatt-lab/SingCellaR documentation built on Aug. 24, 2023, 5:49 p.m.