plot_variable_genes: Plot highly variable genes

In supatt-lab/SingCellaR: SingCellaR: an integrative analysis tool for single-cell RNA sequencing (scRNA-seq) data

Plot highly variable genes

Description

Plot highly variable genes

Usage

plot_variable_genes(
  object,
  quantile_genes_expr_for_fitting = 0.2,
  quantile_genes_cv2_for_fitting = 0.8
)

Arguments

object	The SingCellaR object.
quantile_genes_expr_for_fitting	The minimum quantile of gene expression used for model fitting. Default 0.2
quantile_genes_cv2_for_fitting	The maximum quantile of coefficient of variation used for model fitting. Default 0.8

supatt-lab/SingCellaR documentation built on Aug. 24, 2023, 5:49 p.m.