plot_violin_for_differential_genes: Plot violin-plot for differential genes

In supatt-lab/SingCellaR: SingCellaR: an integrative analysis tool for single-cell RNA sequencing (scRNA-seq) data

Plot violin-plot for differential genes

Description

Plot violin-plot for differential genes

Usage

plot_violin_for_differential_genes(
  objectA = objectA,
  objectB = objectB,
  cellsA = c(),
  cellsB = c(),
  gene_list = c(),
  take_log2 = T,
  groupA.name = "",
  groupB.name = "",
  xlab.text.size = 5,
  point.size = 0.5,
  point.alpha = 0.1
)

Arguments

objectA	The SingCellaR objectA.
objectB	The SingCellaR objectB.
cellsA	The vector of cell names in group A.
cellsB	The vector of cell names in group B.
gene_list	The vector of gene names.
take_log2	is logical. If TRUE, the expression shows in the log2 scale.
groupA.name	The group A name.
groupB.name	The group B name.
xlab.text.size	The font size of the label in the x-axis. Default 5
point.size	The point size. Default 0.2
point.alpha	The alpha parameter. Default 0.1

supatt-lab/SingCellaR documentation built on Aug. 24, 2023, 5:49 p.m.