misolationmap <- function(sf.obj, nb.obj, names.var, propneighb = 0.4, chisqqu = 0.975,
criteria = NULL, carte = NULL, identify = NULL, cex.lab = 0.8,
pch = 16, col = "lightblue3", xlab = "degree of isolation",
ylab = "Pairwise Mahalanobis distances",
axes = FALSE, lablong = "", lablat = "") {
###################################################
########## COMMON to ALL FUNCTIONS in GeoXp
envir <- globalenv()
# Verification of the Spatial Object sf.obj
class.obj <- class(sf.obj)[1]
if(class.obj != "sf")
stop("sf.obj may be a sf object")
# verification on attributes
listvar <- as.data.frame(st_drop_geometry(sf.obj))
listnomvar <- colnames(listvar)
# we propose to refind the same arguments used in first version of GeoXp
if (st_geometry_type(sf.obj, by_geometry = F) %in% c("POINT"))
my_coords <- st_coordinates(st_geometry(sf.obj))
else
my_coords <- st_coordinates(st_point_on_surface(st_geometry(sf.obj)))
long <- my_coords[, 1]
lat <- my_coords[, 2]
# for identifying the selected sites
if (!is.null(identify) && identify %in% colnames(sf.obj))
label <- sf.obj[[identify]]
else
label <- ""
nointer <- FALSE
nocart <- FALSE
buble <- FALSE
z <- NULL
legmap <- NULL
legends <- list(FALSE, FALSE, "", "")
labvar <- c(xlab, ylab)
graphChoice <- ""
varChoice1 <- ""
varChoice2 <- ""
choix <- ""
listgraph <- c("Histogram", "Barplot", "Scatterplot")
# Is there a Tk window already open ?
if (interactive()) {
if (!exists("GeoXp.open", envir = envir) ||
length(ls(envir = .TkRoot$env, all.names = TRUE)) == 2) {
assign("GeoXp.open", TRUE, envir = envir)
} else {
if (get("GeoXp.open", envir = envir)) {
stop(
"A GeoXp function is already open.
Please, close Tk window before calling a new GeoXp function to avoid conflict between graphics")
} else {
assign("GeoXp.open", TRUE, envir = envir)
}
}
}
# Windows device
if(length(dev.list()) == 0 & options("device") == "RStudioGD")
dev.new()
# for graphic
dev.new(noRStudioGD = FALSE)
num_graph <- dev.list()[length(dev.list())]
# for map
dev.new(noRStudioGD = FALSE)
num_carte <- dev.list()[length(dev.list())]
# number of devices
num_supp <- NA
#####################################################
##### Arguments proper to each function
if (is.numeric(names.var)) {
if (all(names.var <= ncol(listvar)))
names.var <- listnomvar[names.var]
else
stop("Dimension of names.var is not good")
}
if(!(all(names.var %in% names(sf.obj))))
stop("names.var is not included in the sf object")
dataset <- listvar[, names.var]
obs <- matrix(FALSE, nrow = length(long), ncol = length(long))
graf <- "Neighbourplot1"
obsref <- obs
outselect = TRUE
outselect2 = TRUE
orderselect = TRUE
W <- nb2mat(nb.obj)
Wref <- W
# calcul des matrices theta et absvar
n <- nrow(dataset)
p <- ncol(dataset)
covr <- covMcd(dataset, alpha = 0.75)
cinv <- solve(covr$cov)
MDglobal <- sqrt(mahalanobis(dataset, covr$center, cinv, inverted = TRUE))
# TRUE/FALSE for non-outlying/outlying:
qchi <- sqrt(qchisq(chisqqu, p))
MDglobalTF <- (MDglobal < qchi)
idx <- matrix(1:n, n, n)
se <- as.vector(idx[lower.tri(idx)])
hlp <- as.matrix(dataset[rep(1:(n - 1), seq((n - 1), 1)), ] - dataset[se, ])
MDij <- sqrt(rowSums((hlp %*% cinv) * hlp))
MDpair <- matrix(0, n, n)
MDpair[lower.tri(MDpair)] <- MDij
MDpair <- t(MDpair)
MDpair[lower.tri(MDpair)] <- MDij
MDpairN <- vector("list", n)
# boundary that should include required proportion of neighbors:
chibound <- rep(NA, n)
theta <- matrix(0, n, n)
absvar <- matrix(0, n, n)
for (i in 1:n) {
MDpairN[[i]] <- MDpair[i, nb.obj[[i]]]
nn <- max(1, round(length(MDpairN[[i]]) * propneighb)) # number of neighbors in tolerance ellipse
nval <- MDpairN[[i]][order(MDpairN[[i]])][nn] # value of largest neighbor to be included
chibound[i] <- pchisq(nval ^ 2, p, MDglobal[i] ^ 2)
theta[i, nb.obj[[i]]] <- chibound[i]
absvar[i, nb.obj[[i]]] <- MDpair[i, nb.obj[[i]]]
}
thetaref <- theta
absvaref <- absvar
thetaref2 <- thetaref
absvaref2 <- absvaref
# sort according to values of "chibound" - separately for outliers and non-outliers
idx1 <- order(chibound[MDglobalTF])
idx0 <- order(chibound[!MDglobalTF])
idxg <- sort(chibound, index.return = TRUE)
# calcul des distances de Mahalanobis par site
rd <- sqrt(mahalanobis(dataset, center = covr$center, cov = covr$cov))
pcrit <- ifelse(p <= 10, (0.24 - 0.003 * p) / sqrt(n), (0.252 - 0.0018 * p) / sqrt(n))
delta <- qchisq(1 - 0.025, p)
d2 <- mahalanobis(dataset, covr$center, covr$cov)
d2ord <- sort(d2)
dif <- pchisq(d2ord, p) - (0.5:n) / n
i <- (d2ord >= delta) & (dif > 0)
alfan <- ifelse(sum(i) == 0, 0, max(dif[i]))
if (alfan < pcrit)
alfan <- 0
cn <- ifelse(alfan > 0, max(d2ord[n - ceiling(n * alfan)], delta), Inf)
alphab <- ifelse(cn != Inf, sqrt(c(cn, qchisq(c(0.75, 0.5, 0.25), ncol(dataset)))),
sqrt(qchisq(c(0.975, 0.75, 0.5, 0.25), ncol(dataset))))
chi2.quant <- rep(0, n)
lalpha <- length(alphab)
for (j in 1:lalpha) {
if (j == 1) {
(chi2.quant[which(rd >= alphab[j])] <- lalpha)
} else {
chi2.quant[which((rd < alphab[j - 1]) &
(rd >= alphab[j]))] <- lalpha + 1 - j
}
}
####################################################
# selection d'un point sur la carte
####################################################
pointfunca <- function() {
if (graf == "pairwise") SGfunc()
graf <<- "Neighbourplot1"
quit <- FALSE
dev.set(num_carte)
title("ACTIVE DEVICE", cex.main = 0.8, font.main = 3, col.main = "red")
title(sub = "To stop selection, click on the right button of the mouse or use ESC",
cex.sub = 0.8, font.sub = 3, col.sub = "red")
while (!quit) {
dev.set(num_carte)
loc <- locator(1)
if (is.null(loc)) {
quit<-TRUE
carte(long = long, lat = lat, obs = obs, sf.obj = sf.obj, num = num_carte,
buble = buble, criteria = criteria, nointer = nointer, cbuble = z, carte = carte,
nocart = nocart, lablong = lablong, lablat = lablat, label = label, cex.lab = cex.lab,
symbol = pch, method = "pairwise", axis = axes, legmap = legmap, legends = legends)
next
}
obs2 <- selectmap(var1 = long, var2 = lat, obs = obs,
Xpoly = loc[1], Ypoly = loc[2], method = "point")
obs <<- (W*obs2 > 0)
if (!outselect)
obs[MDglobalTF, ] <<- FALSE
if (!outselect2)
obs[!MDglobalTF, ] <<- FALSE
carte(long = long, lat = lat, obs = obs, sf.obj = sf.obj, num = num_carte,
buble = buble, criteria = criteria, nointer = nointer, cbuble = z, carte = carte,
nocart = nocart, lablong = lablong, lablat = lablat, label = label, cex.lab = cex.lab,
symbol = pch, method = "pairwise", axis = axes, legmap = legmap, legends = legends)
title("ACTIVE DEVICE", cex.main = 0.8, font.main = 3, col.main = "red")
title(sub = "To stop selection, click on the right button of the mouse or use ESC",
cex.sub = 0.8, font.sub = 3, col.sub = "red")
graphique(var1 = theta, var2 = absvar, obs = obs, num = num_graph,
graph = "pairwise", labvar = labvar, couleurs = col,
symbol = pch, direct = propneighb)
}
}
####################################################
# selection d'un polygone
####################################################
polyfunca <- function() {
if (graf=="pairwise")
SGfunc()
graf <<- "Neighbourplot1"
polyX <- NULL
polyY <- NULL
quit <- FALSE
dev.set(num_carte)
title("ACTIVE DEVICE", cex.main = 0.8, font.main = 3, col.main = "red")
title(sub = "To stop selection, click on the right button of the mouse or use ESC",
cex.sub = 0.8, font.sub = 3, col.sub = "red")
while (!quit) {
dev.set(num_carte)
loc <- locator(1)
if (is.null(loc)) {
quit <- TRUE
next
}
polyX <- c(polyX, loc[1])
polyY <- c(polyY, loc[2])
lines(polyX, polyY)
}
polyX <- c(polyX, polyX[1])
polyY <- c(polyY, polyY[1])
if (length(polyX) > 0) {
lines(polyX, polyY)
obs2 <- selectmap(var1 = long, var2 = lat, obs = obs,
Xpoly = polyX, Ypoly = polyY, method = "poly")
obs <<- (W*obs2 > 0)
if (!outselect)
obs[MDglobalTF, ] <<- FALSE
if(!outselect2)
obs[!MDglobalTF, ] <<- FALSE
# graphiques
carte(long = long, lat = lat, obs = obs, sf.obj = sf.obj, num = num_carte,
buble = buble, criteria = criteria, nointer = nointer, cbuble = z, carte = carte,
nocart = nocart, lablong = lablong, lablat = lablat, label = label, cex.lab = cex.lab,
symbol = pch, method = "pairwise", axis = axes, legmap = legmap, legends = legends)
graphique(var1 = theta, var2 = absvar, obs = obs, num = num_graph, graph = "pairwise", labvar = labvar,
couleurs = col, symbol = pch, direct = propneighb)
}
}
####################################################
# selection d'un point sur l'angleplot
####################################################
pointfunc <- function() {
if (graf == "Neighbourplot1")
SGfunc()
graf <<- "pairwise"
quit <- FALSE
dev.set(num_graph)
title("ACTIVE DEVICE", cex.main = 0.8, font.main = 3, col.main = "red")
title(sub = "To stop selection, click on the right button of the mouse or use ESC",
cex.sub = 0.8, font.sub = 3, col.sub = "red")
while (!quit) {
dev.set(num_graph)
loc <- locator(1)
if (is.null(loc)) {
quit <- TRUE
graphique(var1 = theta, var2 = absvar, obs = obs, num = num_graph, graph = "pairwise", labvar = labvar,
couleurs = col, symbol = pch, direct = propneighb)
next
}
obs <<- selectstat(var1 = theta, var2 = absvar, obs = obs,Xpoly = loc[1], Ypoly = loc[2],
method = "AnglePoint",long = long, lat = lat)
if (!outselect)
obs[MDglobalTF, ] <<- FALSE
if (!outselect2)
obs[!MDglobalTF, ] <<- FALSE
diag(obs) <<- FALSE
graphique(var1 = theta, var2 = absvar, obs = obs, num = num_graph,
graph = "pairwise", labvar = labvar, couleurs = col,
symbol = pch, direct = propneighb)
title("ACTIVE DEVICE", cex.main = 0.8, font.main = 3, col.main = "red")
title(sub = "To stop selection, click on the right button of the mouse or use ESC",
cex.sub = 0.8, font.sub = 3, col.sub = "red")
carte(long = long, lat = lat, obs = obs, sf.obj = sf.obj, num = num_carte,
buble = buble, criteria = criteria, nointer = nointer, cbuble = z, carte = carte,
nocart = nocart, lablong = lablong, lablat = lablat, label = label, cex.lab = cex.lab,
symbol = pch, method = "pairwise", axis = axes, legmap = legmap, legends = legends)
}
}
####################################################
# selection des outliers
####################################################
outlier <- function() {
outselect <<- !outselect
labvar <- c(xlab,ylab)
if (outselect) {
tkmessageBox(message = "You have remited non global outliers")
theta <<- thetaref
absvar <<- absvaref
thetaref2 <<- thetaref
absvaref2 <<- absvaref
if (!orderselect) {
labvar <- c("Rank",ylab)
ind0 <- which(theta == 0, arr.ind = TRUE)
theta[idxg$ix, ] <<- t(matrix(rep(1:n, each = length(idxg$ix)),
length(idxg$ix), length(idxg$ix)))
theta[ind0] <<- 0
theta <<- theta
}
} else {
tkmessageBox(message = "You have selected only global outliers")
SGfunc()
if (!outselect2) {
theta <<- thetaref
absvar <<- absvaref
if (!orderselect) {
labvar <- c("Rank", ylab)
ind0 <- which(theta == 0, arr.ind = TRUE)
theta[idxg$ix, ] <<- t(matrix(rep(1:n, each = length(idxg$ix)),
length(idxg$ix), length(idxg$ix)))
theta[ind0] <<- 0
theta <<- theta
}
}
theta[MDglobalTF, ] <<- 0
absvar[MDglobalTF, ] <<- 0
thetaref2 <<- theta
absvaref2 <<- absvar
}
graphique(var1 = theta, var2 = absvar, obs = obs, num = num_graph,
graph = "pairwise", labvar = labvar, couleurs = col,
symbol = pch, direct = propneighb)
carte(long = long, lat = lat, obs = obs, sf.obj = sf.obj, num = num_carte,
buble = buble, criteria = criteria, nointer = nointer, cbuble = z, carte = carte,
nocart = nocart, lablong = lablong, lablat = lablat, label = label, cex.lab = cex.lab,
symbol = pch, method = "pairwise", axis = axes, legmap = legmap, legends = legends)
}
####################################################
# selection des non outliers
####################################################
outlier2 <- function() {
outselect2 <<- !outselect2
labvar <- c(xlab, ylab)
if (!outselect)
tkmessageBox(message="You have selected non global outliers")
if (outselect)
tkmessageBox(message="You have remited global outliers")
if (outselect2) {
theta <<- thetaref
absvar <<- absvaref
thetaref2 <<- thetaref
absvaref2 <<- absvaref
if (!orderselect) {
labvar <- c("rank", ylab)
ind0 <- which(theta == 0, arr.ind = TRUE)
theta[idxg$ix, ] <<- t(matrix(rep(1:n, each = length(idxg$ix)),
length(idxg$ix),length(idxg$ix)))
theta[ind0] <<- 0
theta <<- theta
}
} else {
SGfunc()
if (!outselect) {
theta <<- thetaref
absvar <<- absvaref
if(!orderselect) {
labvar <- c("Rank", ylab)
ind0 <- which(theta == 0, arr.ind = TRUE)
theta[idxg$ix, ] <<- t(matrix(rep(1:n, each = length(idxg$ix)),
length(idxg$ix),length(idxg$ix)))
theta[ind0] <<- 0
theta <<- theta
}
}
theta[!MDglobalTF, ] <<- 0
absvar[!MDglobalTF, ] <<- 0
thetaref2 <<- theta
absvaref2 <<- absvar
}
graphique(var1 = theta, var2 = absvar, obs = obs, num = num_graph,
graph = "pairwise", labvar = labvar, couleurs = col,
symbol = pch, direct = propneighb)
carte(long = long, lat = lat, obs = obs, sf.obj = sf.obj, num = num_carte,
buble = buble, criteria = criteria, nointer = nointer, cbuble = z, carte = carte,
nocart = nocart, lablong = lablong, lablat = lablat, label = label, cex.lab = cex.lab,
symbol = pch, method = "pairwise", axis = axes, legmap = legmap, legends = legends)
}
####################################################
# trier les observations
####################################################
ordering <- function() {
orderselect <<- !orderselect
if (orderselect)
tkmessageBox(message="Degree of isolation on the x-axis")
if (!orderselect)
tkmessageBox(message="Rank on the x-axis")
if (orderselect) {
theta <<- thetaref
absvar <<- absvaref
} else {
labvar <- c("Rank", ylab)
ind0 <- which(theta == 0, arr.ind = TRUE)
theta[idxg$ix, ] <<- t(matrix(rep(1:n, each = length(idxg$ix)),
length(idxg$ix), length(idxg$ix)))
theta[ind0] <<- 0
theta <<- theta
}
graphique(var1 = theta, var2 = absvar, obs = obs, num = num_graph,
graph = "pairwise", labvar = labvar, couleurs = col,
symbol = pch, direct = propneighb)
carte(long = long, lat = lat, obs = obs, sf.obj = sf.obj, num = num_carte,
buble = buble, criteria = criteria, nointer = nointer, cbuble = z, carte = carte,
nocart = nocart, lablong = lablong, lablat = lablat, label = label, cex.lab = cex.lab,
symbol = pch, method = "pairwise", axis = axes, legmap = legmap, legends = legends)
}
####################################################
# selection d'un polygone sur l'angleplot
####################################################
polyfunc <- function() {
if (graf == "Neighbourplot1")
SGfunc()
graf <<- "pairwise"
quit <- FALSE
polyX <- NULL
polyY <- NULL
dev.set(num_graph)
title("ACTIVE DEVICE", cex.main = 0.8, font.main = 3, col.main = "red")
title(sub = "To stop selection, click on the right button of the mouse or use ESC",
cex.sub = 0.8, font.sub = 3, col.sub = "red")
while (!quit) {
dev.set(num_graph)
loc <- locator(1)
if (is.null(loc)) {
quit <- TRUE
next
}
polyX <- c(polyX, loc[1])
polyY <- c(polyY, loc[2])
if (length(polyX) > 0)
lines(polyX, polyY)
}
polyX <- c(polyX, polyX[1])
polyY <- c(polyY, polyY[1])
if (length(polyX) > 0) {
lines(polyX, polyY)
for (i in 1:length(long)) {
my_points <- st_as_sf(data.frame(x = theta[, i], y = absvar[, i]), coords = c("x", "y"))
polyg <- cbind(unlist(polyX), unlist(polyY))
pol <- st_sfc(st_polygon(list(polyg)))
def <- as.vector(st_intersects(my_points, pol, sparse = FALSE))
obs[def, i] <<- !obs[def, i]
}
if (!outselect)
obs[MDglobalTF, ] <<- FALSE
if (!outselect2)
obs[!MDglobalTF,]<<-FALSE
graphique(var1 = theta, var2 = absvar, obs = obs, num = num_graph,
graph = "pairwise", labvar = labvar, couleurs = col,
symbol = pch, direct = propneighb)
carte(long = long, lat = lat, obs = obs, sf.obj = sf.obj, num = num_carte,
buble = buble, criteria = criteria, nointer = nointer, cbuble = z, carte = carte,
nocart = nocart, lablong = lablong, lablat = lablat, label = label, cex.lab = cex.lab,
symbol = pch, method = "pairwise", axis = axes, legmap = legmap, legends = legends)
}
}
####################################################
# contour des unites spatiales
####################################################
cartfunc <- function() {
if (length(carte) != 0) {
nocart <<- !nocart
carte(long = long, lat = lat, obs = obs, sf.obj = sf.obj, num = num_carte,
buble = buble, criteria = criteria, nointer = nointer, cbuble = z, carte = carte,
nocart = nocart, lablong = lablong, lablat = lablat, label = label, cex.lab = cex.lab,
symbol = pch, method = "pairwise", axis = axes, legmap = legmap, legends = legends)
} else {
tkmessageBox(message = "Spatial contours have not been given",
icon = "warning", type = "ok")
}
}
####################################################
# rafraichissement des graphiques
####################################################
SGfunc <- function() {
obs <<- matrix(FALSE, nrow = length(long), ncol = length(long))
carte(long = long, lat = lat, obs = obs, sf.obj = sf.obj, num = num_carte,
buble = buble, criteria = criteria, nointer = nointer, cbuble = z, carte = carte,
nocart = nocart, lablong = lablong, lablat = lablat, label = label, cex.lab = cex.lab,
symbol = pch, method = "pairwise", axis = axes, legmap = legmap, legends = legends)
graphique(var1 = theta, var2 = absvar, obs = obs, num = num_graph,
graph = "pairwise", labvar = labvar, couleurs = col,
symbol = pch, direct = propneighb)
}
####################################################
# quitter l'application
####################################################
quitfunc <- function() {
tkdestroy(tt)
assign("GeoXp.open", FALSE, envir = envir)
dev.off(num_graph)
dev.off(num_carte)
}
quitfunc2 <- function() {
fig_save <- "fig_GeoXp.pdf"
map_save <- "map_GeoXp.pdf"
k <- 1
while(file.exists(fig_save)) {
fig_save <- paste("fig_GeoXp", "_", k, ".pdf", sep = "")
k <- k + 1
}
pdf(fig_save)
graphique(var1 = theta, var2 = absvar, obs = obs, num = dev.list()[length(dev.list())],
graph = "pairwise", labvar = labvar, couleurs = col,
symbol = pch, direct = propneighb)
dev.off()
k <- 1
while(file.exists(map_save)) {
map_save <- paste("map_GeoXp", "_", k, ".pdf", sep = "")
k <- k + 1
}
pdf(map_save)
carte(long = long, lat = lat, obs = obs, sf.obj = sf.obj, num = dev.list()[length(dev.list())],
buble = buble, criteria = criteria, nointer = nointer, cbuble = z, carte = carte,
nocart = nocart, lablong = lablong, lablat = lablat, label = label, cex.lab = cex.lab,
symbol = pch, method = "pairwise", axis = axes, legmap = legmap, legends = legends)
dev.off()
tkdestroy(tt)
assign("GeoXp.open", FALSE, envir = envir)
cat("Results have been saved in last.select object \n")
cat("Map has been saved in", map_save, "\n")
cat("Figure has been saved in", fig_save, "\n")
assign("last.select", which(obs), envir = envir)
dev.off(num_carte)
dev.off(num_graph)
}
####################################################
# Open a no interactive selection
####################################################
fnointer <- function() {
if (length(criteria) != 0) {
nointer <<- !nointer
carte(long = long, lat = lat, obs = obs, sf.obj = sf.obj, num = num_carte,
buble = buble, criteria = criteria, nointer = nointer, cbuble = z, carte = carte,
nocart = nocart, lablong = lablong, lablat = lablat, label = label, cex.lab = cex.lab,
symbol = pch, method = "pairwise", axis = axes, legmap = legmap, legends = legends)
} else {
tkmessageBox(message = "Criteria has not been given",
icon = "warning", type = "ok")
}
}
####################################################
# Bubble
####################################################
fbubble <- function() {
res2<-choix.bubble(buble, cbind(chi2.quant, listvar), c("chi2.quant",listnomvar), legends, num_graph, num_carte)
buble <<- res2$buble
legends <<- res2$legends
z <<- res2$z
legmap <<- res2$legmap
if (legends[[1]]) {
if ((legmap[length(legmap)] == "chi2.quant")) {
legmap <<- c(legmap, paste(">", round(alphab[1], 2)),
paste(round(alphab[2], 2), "-", round(alphab[1], 2)),
paste(round(alphab[3], 2), "-", round(alphab[2], 2)),
paste(round(alphab[4], 2), "-", round(alphab[3], 2)),
paste("<", round(alphab[4], 2)), "Mahalanobis")
}
}
carte(long = long, lat = lat, obs = obs, sf.obj = sf.obj, num = num_carte,
buble = buble, criteria = criteria, nointer = nointer, cbuble = z, carte = carte,
nocart = nocart, lablong = lablong, lablat = lablat, label = label, cex.lab = cex.lab,
symbol = pch, method = "pairwise", axis = axes, legmap = legmap, legends = legends)
}
####################################################
# Representation graphique
####################################################
carte(long = long, lat = lat, obs = obs, sf.obj = sf.obj, num = num_carte, lablong = lablong, lablat = lablat,
label = label, cex.lab = cex.lab, symbol = pch, method = "pairwise",
axis = axes, legends = legends)
graphique(var1 = theta, var2 = absvar, obs = obs, num = num_graph,
graph = "pairwise", labvar = labvar, couleurs = col, symbol = pch,
direct = propneighb)
####################################################
# creation de la boite de dialogue
####################################################
if (interactive()) {
fontheading <- tkfont.create(family = "times", size = 14, weight = "bold")
tt <- tktoplevel()
tkwm.title(tt, "misolationmap")
frame1a <- tkframe(tt, relief = "groove", borderwidth = 2, background = "white")
tkpack(tklabel(frame1a, text = "Interactive selection", font = "Times 14",
foreground = "blue", background = "white"))
tkpack(tklabel(frame1a, text = "Work on the map", font = "Times 12",
foreground = "darkred", background = "white"))
point.but <- tkbutton(frame1a, text = "Selection by point", command = pointfunca)
poly.but <- tkbutton(frame1a, text = "Selection by polygon", command = polyfunca)
tkpack(point.but, poly.but, side = "left", expand = "TRUE",
fill = "x")
tkpack(frame1a, expand = "TRUE", fill = "x")
frame1c <- tkframe(tt, relief = "groove", borderwidth = 2, background = "white")
tkpack(tklabel(frame1c, text = "Work on the graphic", font = "Times 12",
foreground = "darkred", background = "white"))
intervalle1.but <- tkbutton(frame1c, text = "Selection by point", command = pointfunc)
intervalle11.but <- tkbutton(frame1c, text = "Selection by polygon", command = polyfunc)
tkpack(intervalle1.but,intervalle11.but, side = "left", expand = "TRUE", fill = "x")
tkpack(frame1c, expand = "TRUE", fill = "x")
frame1b <- tkframe(tt, relief = "groove", borderwidth = 2, background = "white")
nettoy.but <- tkbutton(frame1b, text = " Reset selection " , command = SGfunc)
tkpack(nettoy.but, side = "left", expand = "TRUE", fill = "x")
tkpack(frame1b, expand = "TRUE", fill = "x")
frame2 <- tkframe(tt, relief = "groove", borderwidth = 2, background = "white")
tkpack(tklabel(frame2, text = "Options", font = "Times 14",
foreground = "blue", background = "white"))
tkpack(tklabel(frame2, text = "Spatial contours", font = "Times 11",
foreground = "darkred", background = "white"),
tklabel(frame2, text = "Preselected sites", font = "Times 11",
foreground = "darkred", background = "white"),
tklabel(frame2, text = "Bubbles", font = "Times 11",
foreground = "darkred", background = "white"), side = "left", fill="x", expand = "TRUE")
tkpack(frame2, expand = "TRUE", fill = "x")
frame2b <- tkframe(tt, relief = "groove", borderwidth = 2, background = "white")
nocou1.but <- tkbutton(frame2b, text = "On/Off", command = cartfunc)
noint1.but <- tkbutton(frame2b, text = "On/Off", command = fnointer)
bubble.but <- tkbutton(frame2b, text = "On/Off", command = fbubble)
tkpack(nocou1.but,noint1.but,bubble.but, side = "left", expand = "TRUE",
fill = "x")
tkpack(frame2b, expand = "TRUE", fill = "x")
frame2c <- tkframe(tt, relief = "groove", borderwidth = 2, background = "white")
tkpack(tklabel(frame2c, text = "Only global outliers ", font = "Times 11",
foreground = "darkred", background = "white"),
tklabel(frame2c, text = "Without global outliers ", font = "Times 11",
foreground = "darkred", background = "white"),
tklabel(frame2c, text = "Rank on the x-axis", font = "Times 11",
foreground = "darkred", background = "white"), side = "left", fill="x", expand = "TRUE")
tkpack(frame2c, expand = "TRUE", fill = "x")
frame2b <- tkframe(tt, relief = "groove", borderwidth = 2, background = "white")
nocou1.but <- tkbutton(frame2b, text = "On/Off", command = outlier)
noint1.but <- tkbutton(frame2b, text = "On/Off", command = outlier2)
bubble.but <- tkbutton(frame2b, text = "On/Off", command = ordering)
tkpack(nocou1.but,noint1.but,bubble.but, side = "left", expand = "TRUE",
fill = "x")
tkpack(frame2b, expand = "TRUE", fill = "x")
frame3 <- tkframe(tt, relief = "groove", borderwidth = 2, background = "white")
tkpack(tklabel(frame3, text = "Exit", font = "Times 14",
foreground = "blue", background = "white"))
quit.but <- tkbutton(frame3, text = "Save results", command = quitfunc2)
quit.but2 <- tkbutton(frame3, text = "Exit without saving", command = quitfunc)
tkpack(quit.but, quit.but2, side = "left", expand = "TRUE",
fill = "x")
tkpack(frame3, expand = "TRUE", fill = "x")
}
####################################################
return(invisible())
}
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