E3RescaleIntervals: Apply interval rescale factors, i.e. change low and high...

In tkonopka/ExpCube: Analysis of cell/stimulus/gene expression data

Description

When a gene expression estimate is, e.g. (2, 4, 6) for (low, middle, high) and the rescale factor is 1.5, the output expression estimate will be (1, 4, 7). The middle value stays the same, the distances between the outer values and the middle is rescale by the factor.

Usage

E3RescaleIntervals(sampledata, samplenames, gene.rescaling)

Arguments

sampledata	- a list with tables $expression, $expression.low, $expression.high
samplenames	- character vector. Names of all samples to rescale
gene.rescaling	- numeric vector. Rescales all intervals in both directions. The function assumes length of this vector is equal to rows of the expression data

Details

Function returns a similar list of table as that in sampledata.

tkonopka/ExpCube documentation built on May 31, 2019, 3:44 p.m.