E3PlotVioSet: Draw a set of violins (using Rcssplot, sm)

Description Usage Arguments

Description

Draw a set of violins (using Rcssplot, sm)

Usage

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E3PlotVioSet(valset, colors = NULL, xlim = c(-1, 1), xat = c(-0.5, 0,
  0.5), highlight = NULL, hidedots = FALSE, showconnect = FALSE,
  xlab = "", ylab = "", main = "", spacer = 0.04, Rcss = "default",
  Rcssclass = c())

Arguments

valset

- named list of numeric vectors. These vectors are the datapoints associated with each group and will be used to generate violins. The data points should contain names themselves (to use highlight option below)

colors

- vector of colors. One color for each violin

xlim

- numeric vector of length two. Range of x values

xat

- numeric vector. Determines where markers will be placed on the horizontal axis

highlight

- vector of item names to highlight

hidedots

- logical. Set TRUE to avoid dots on the violins.

showconnect

- logical. Set TRUE to connect highlighted items with lines

xlab

- character string. Text to display beside x axis

ylab

- character string. Text to display besdie y axis

main

- character string. Text to display in the title of the plot

spacer

- numeric. Determines space between adjacent violins

Rcss

- Rcss object. Used to style the heatmap with Rcssplot.

Rcssclass

- character vector. Classes to tune Rcssplot formatting.


tkonopka/ExpCube documentation built on May 31, 2019, 3:44 p.m.