gene expression data

Draw a contour plot with select markers

E3PlotContourScatter(x, y, highlight = NULL, col = "#ff0000",
  highlight.label = FALSE, density.transformation = function(x) {     x },
  show.fit = FALSE, xylim = c(0.1, 100), xymajor = 10^seq(-3, 6),
  xyminor = c(), xlab = "", ylab = "", main = "",
  breakrange = range(c(x, y)), numbreaks = 20, Rcss = "default",
  Rcssclass = "contour")

`x`	- numeric vector with names. Coordinates for x axis.
`y`	- numeric vector with names. Coordinates for y axis
`highlight`	- character string. names of x,y to highlight.
`col`	- color. For highlighting points
`highlight.label`	- character vector. Names of points to highlight on the plot
`density.transformation`	- obsolete, do not change.
`show.fit`	- logical. Set TRUE to display a fitted line through highlighted points
`xylim`	- numeric vector of length two. Ranges for axes
`xymajor`	- numeric vector. Location of major tick marks
`xyminor`	- numeric vector. Location of minor tick marks
`xlab`	- character string. Label for x axis
`ylab`	- character string. Label for y axis
`main`	- character strings. Title of the plot
`breakrange`	- numeric vector of length 2. Lower and upper bounds for contour plot
`numbreaks`	- integer. Number of partitions for contour matrix
`Rcss`	- Rcss object. Used to style the heatmap with Rcssplot.
`Rcssclass`	- character vector. Classes to tune Rcssplot formatting.
`label`	- logical. Set TRUE to draw text labels next to highlighted points