extract_branch: Extract a branch from a tree

In vicstefanou/ViSCA: Cell-Movie Analysis and Visualization

Description

Extracts a branch from a lineage or division tree. The branch for extraction is defined by its root cell.

Usage

extract_branch(tree, cell)

Arguments

tree	The lineage or division tree, an object of class "igraph".
cell	The label of the cell in the tree which is the root of the branch to be extracted, a character string. It can be any cell, as returned from get_cells.

Value

A named list with the following components:

treeNew	The new tree with the branch extracted, an object of class "igraph".
branch	The extracted connected motherless branch, an object of class "igraph".

See Also

add_branch for connecting a motherless branch to a lineage tree.

vicstefanou/ViSCA documentation built on May 31, 2019, 10:50 p.m.