Description Usage Arguments Details Value
Creates the X-Y-Z scatter plot of three numeric attributes of a lineage or division tree.
1 2 3 4 |
tree |
The lineage or division tree, an object of class |
treeT |
A character string naming the type of
|
attr1, attr2, attr3 |
The names of the attributes in the |
unit1, unit2, unit3 |
The units of the corresponding |
attrC |
The name of the attribute in the |
unitC |
The unit of |
NC |
Number of colonies in the movie (if |
attrS |
The name of the attribute in the |
sizeL |
Size of explanatory legends, a non-zero positive numeric value.
The default value is |
save |
A logical value ( |
savePars |
A named list specifying the parameters of the generated image file.
This argument is ignored in case
|
Each data point (x,y,z) represents the value of attr1
, attr2
and attr3
of a cell, respectively.
The horizontal axis of the plot corresponds to the x-axis, the vertical to the z-axis and the diagonal to the y-axis.
The scatter plot is created for all cells that are included in the analysis,
as returned from get_cells
,
except for cells with NA
value in attr1
or attr2
or attr3
.
By default, all data points are purple dot points.
The linear regression plane is also drawn on the plot.
X, Y are the predictor variables and Z is the response.
The parameters of the regression plane are found using the linear least squares method
provided by lm
.
A named list with the following components:
Ncells |
Number of cells, a non-zero positive integer value. |
regression |
A named list with the following components:
In case less than 3 unique data points exist, |
In case no cells exist, no plot is generated and NULL
is returned.
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