get_cells: Get cells of a tree

In vicstefanou/ViSCA: Cell-Movie Analysis and Visualization

Description

Returns the labels of the cells in a lineage or division tree.

Usage

get_cells(tree, treeT = c("LT", "DT"), type = c("all", "nr", "inc"))

Arguments

tree	The lineage or division tree, an object of class "igraph".
treeT	A character string naming the type of tree: "LT" if tree is a lineage tree "DT" if tree is a division tree This argument is ignored in case type = "all"
type	A character string naming the type of cells to be returned: "all" for all cells (including any existing imaginary root cells) "nr" for all non-root cells (excluding any existing imaginary root cells) "inc" for all cells included in the analysis

Value

The labels of the corresponding cells, a vector of character strings.

vicstefanou/ViSCA documentation built on May 31, 2019, 10:50 p.m.